GeneMark-ES

GeneMark-ES is part of a family of  gene prediction programs developed at Georgia Institute of Technology.  GeneMark-ES is used to predict genes in eukaryotes.

Documentation

• GeneMark home
• GeneMark-ES documentation
• Citation: Alexandre Lomsadze et al Gene identification in novel eukaryotic genomes by self-training algorithm  Nucleic Acids Research (2005) 33, pp 6494-6506

Usage on Bridges-2

To see what versions of GeneMark-ES are available and if there is more than one, which is the default, along with some help, type

module spider genemark-es

To use GeneMark-ES, include a command like this in your batch script or interactive session to load the GeneMark-ES module: (note ‘module load’ is case-sensitive):

module load GeneMark-ES